WORKLIST ENTRIES (1):
HIVVPRVPX View alignment View Structure HIV R-ORF/X-ORF protein signature
Type of fingerprint: COMPOUND with 3 elements
Links:
INTERPRO; IPR000012
PFAM; PF00522 VPR
Creation date 09-DEC-1995; UPDATE 28-JUL-1999
1. TSUJIMOTO, H., HASEGAWA, A., MAKI, N., FUKASAWA, M., MIURA, T.,
SPEIDEL, S., COOPER, R.W., MORIYAMA, E.N., GOJOBORI, T. AND HAYAMI, M.
Sequence of a novel simian immunodeficiency virus from a wild-caught
African mandrill.
NATURE 341 539-541 (1989).
2. HASEGAWA, A., TSUJIMOTO, H., MAKI, N., ISHIKAWA, K., MIURA, T.,
FUKASAWA, M., MIKI, K. AND HAYAMI, M.
Genomic divergence of HIV-2 from Ghana.
AIDS RES.HUM.RETROVIRUSES 5 593-604 (1989).
HIV is the human retrovirus associated with AIDS (acquired immune
deficiency syndrome), and SIV its simian counterpart. Three main groups
of primate lentivirus are known, designated HIV-1, HIV-2/SIVMAC/SIVSM and
SIVAGM. More recently, SIVMND has been suggested to represent a fourth
distinct group [1]. These groups are believed to have diverged from a
common ancestor long before the spread of AIDS in humans.
Genetic variation in HIV-1 and HIV-2 has been studied extensively, and
the nucleotide sequences reported for several strains [2]. ORF analysis
has revealed 2 open reading frames, yielding the so-called R- and X-ORF
proteins, whose functions are unknown, but which show a high degree of
sequence similarity.
HIVVPRVPX is a 3-element fingerprint that provides a signature for the
HIV R-ORF and X-ORF proteins. The fingerprint was derived from an initial
alignment of 8 sequences: the motifs were drawn from short conserved
regions spanning the full alignment length. Three iterations on OWL26.3
were required to reach convergence, at which point a true set comprising
107 sequences was identified. Two partial matches were also found.
An update on SPTR37_9f identified a true set of 266 sequences, and 5
partial matches.
SUMMARY INFORMATION
266 codes involving 3 elements
5 codes involving 2 elements
COMPOSITE FINGERPRINT INDEX
3| 266 266 266
2| 5 5 0
--+----------------
| 1 2 3
True positives..
O42071 VPR_HV1BR Q79252 Q79248
Q79245 Q79238 O71267 O71254
O73196 Q71999 Q79241 Q79243
Q79275 O71258 O91890 O36203
Q74775 Q74785 Q79251 Q74786
O36217 Q79234 Q79279 Q79672
O40218 VPR_HV1JR Q89636 Q79788
Q72014 Q71881 O41800 Q72981
Q72989 VPR_HV1Y2 Q79264 Q71931
Q71925 Q71911 Q71904 Q71897
O42045 O36216 O36210 Q79235
Q79271 Q79242 O41768 P87921
Q75757 Q79257 Q79793 VPR_HV1N5
O71972 O42084 VPR_HV1RH O70893
Q79269 VPR_HV1A2 O71967 O90092
O90100 Q79260 Q79281 Q79276
Q79239 VPR_HV1EL O36202 O36205
O36206 Q79273 O36213 O89942
Q71918 O36215 Q79237 Q72492
Q79270 O70676 Q79280 P88158
VPR_HV1Z2 O71263 Q79253 O42058
Q74455 O72610 VPR_HV1MA Q79244
O70888 O90075 Q79246 Q79266
Q79278 O90160 Q89838 Q74809
O91082 Q79277 O71273 VPR_HV1OY
O12160 Q71815 O71277 Q89677
Q89494 Q74837 O41785 Q79233
Q79263 Q73369 Q74784 Q79249
Q79247 VPR_HV1MN Q79256 O36218
Q71944 O42054 Q79262 Q73332
Q79267 O92296 Q79236 O89928
Q79259 O36212 O42035 O42036
O42077 O36208 O90084 O72615
P88436 Q79265 Q89588 P88152
Q79255 Q71938 Q74772 Q74773
Q79284 O36207 Q79268 Q79274
O41776 O89935 O36209 Q79282
Q74781 Q74776 O70898 Q97061
Q79254 O91897 Q72500 Q77693
VPR_HV1SC Q74780 Q79258 O36204
Q74777 Q74779 Q77375 Q89467
O91140 P88434 Q89493 O90066
Q76577 O91148 O90059 Q75004
VPR_SIVCZ VPR_HV1B1 VPR_HV1B5 P89694
O91136 O91152 Q79668 O36211
P89843 Q74778 O91132 O91162
O91166 O91144 O91170 O91180
VPR_SIVS4 O11785 Q07392 Q88017
VPR_SIVMK VPR_SIVML Q85605 VPR_SIVSP
Q89638 P89157 VPR_SIVM1 Q04270
O57061 Q88146 O90320 O12332
Q87957 Q87966 Q76624 VPR_HV2D2
VPR_HV2SB Q76637 VPR_HV2NZ VPR_HV2CA
VPR_HV2BE VPR_HV2RO Q74231 VPR_HV2D1
VPR_HV2G1 VPR_HV2KR VPR_HV2ST Q88101
O12384 O12383 VPX_SIVA1 Q87110
VPX_SIVM1 Q89552 Q88064 Q88050
Q88020 Q07393 Q04273 Q85604
VPX_SIVML VPX_SIVMK Q88057 VPX_HV2G1
Q88068 VPX_SIVAG VPX_HV2D1 Q89721
Q87481 VPX_HV2BE P88144 VPX_SIVAT
Q88058 Q87483 VPX_SIVAI VPX_HV2ST
VPX_HV2CA VPX_SIVS4 Q88145 VPX_HV2KR
O90319 VPX_HV2SB P89156 Q76623
VPX_HV2RO Q89827 O90275 VPX_HV2D2
Q76636 Q88137 VPX_SIVSP Q88125
Q88131 VPR_SIVGB
Subfamily: Codes involving 2 elements
Subfamily True positives..
O36214 O90175 Q87624 VPX_HV2NZ
DYHC_PARTE
PROTEIN TITLES
O42071 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
VPR_HV1BR VPR PROTEIN (R ORF PROTEIN) - HUMAN IMMUNODEFICIENCY VIRUS T
Q79252 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q79248 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q79245 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q79238 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
O71267 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
O71254 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
O73196 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q71999 PATIENT 3799(9-93), CLONE 12 ACCESSORY REGION GENES, CDS - H
Q79241 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q79243 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q79275 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
O71258 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
O91890 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
O36203 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q74775 ISOLATE 890-10, VPR - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q74785 ISOLATE VR-1, VPR - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q79251 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q74786 ISOLATE VR-2, VPR - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
O36217 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q79234 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q79279 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q79672 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
O40218 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
VPR_HV1JR VPR PROTEIN (R ORF PROTEIN) - HUMAN IMMUNODEFICIENCY VIRUS T
Q89636 PATIENT 3799(9-93), CLONE 13 ACCESSORY REGION GENES, CDS - H
Q79788 VPR POLYPROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q72014 PATIENT 3799(12-88), CLONE 22 ACCESSORY REGION GENES, CDS -
Q71881 PATIENT 3799(9-93), CLONE 15, ACCESSORY REGION GENES, COMPLE
O41800 HIV-1 ISOLATE 92NG083 FROM NIGERIA COMPLETE GENOME - HUMAN I
Q72981 IMMUNODEFICIENCY VIRUS HIV-1, CLONE ACH320.2A.1.2, COMPLETE
Q72989 IMMUNODEFICIENCY VIRUS HIV-1, CLONE ACH320.2A.2.1, COMPLETE
VPR_HV1Y2 VPR PROTEIN (R ORF PROTEIN) - HUMAN IMMUNODEFICIENCY VIRUS T
Q79264 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q71931 CNTRL 1, CLONE 6, ACCESSORY REGION GENES, COMPLETE CDS - HUM
Q71925 CNTRL 1, CLONE 5, ACCESSORY REGION GENES, COMPLETE CDS - HUM
Q71911 CNTRL 1, CLONE 3, ACCESSORY REGION GENES, COMPLETE CDS - HUM
Q71904 CNTRL 1, CLONE 2, ACCESSORY REGION GENES, COMPLETE CDS - HUM
Q71897 CNTRL 1, CLONE 1, ACCESSORY REGION GENES, COMPLETE CDS - HUM
O42045 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
O36216 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
O36210 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q79235 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q79271 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q79242 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
O41768 HIV-1 ISOLATE 84ZR085 FROM ZAIRE COMPLETE GENOME - HUMAN IMM
P87921 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q75757 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q79257 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q79793 ISOLATE NY5, COMPLETE GENOME. INFECTIOUS SINGLE LTR MOLECULA
VPR_HV1N5 VPR PROTEIN (R ORF PROTEIN) - HUMAN IMMUNODEFICIENCY VIRUS T
O71972 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
O42084 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
VPR_HV1RH VPR PROTEIN (R ORF PROTEIN) - HUMAN IMMUNODEFICIENCY VIRUS T
O70893 HIV-1 ISOLATE 93BR029 FROM BRAZIL COMPLETE GENOME - HUMAN IM
Q79269 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
VPR_HV1A2 VPR PROTEIN (R ORF PROTEIN) - HUMAN IMMUNODEFICIENCY VIRUS T
O71967 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
O90092 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
O90100 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q79260 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q79281 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q79276 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q79239 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
VPR_HV1EL VPR PROTEIN (R ORF PROTEIN) - HUMAN IMMUNODEFICIENCY VIRUS T
O36202 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
O36205 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
O36206 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q79273 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
O36213 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
O89942 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q71918 CNTRL 1, CLONE 4, ACCESSORY REGION GENES, COMPLETE CDS - HUM
O36215 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q79237 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q72492 CLADE B, PROVIRAL CLONE - HUMAN IMMUNODEFICIENCY VIRUS TYPE
Q79270 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
O70676 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q79280 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
P88158 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
VPR_HV1Z2 VPR PROTEIN (R ORF PROTEIN) - HUMAN IMMUNODEFICIENCY VIRUS T
O71263 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q79253 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
O42058 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q74455 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
O72610 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
VPR_HV1MA VPR PROTEIN (R ORF PROTEIN) - HUMAN IMMUNODEFICIENCY VIRUS T
Q79244 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
O70888 HIV-1 ISOLATE 93BR020 FROM BRAZIL COMPLETE GENOME - HUMAN IM
O90075 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q79246 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q79266 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q79278 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
O90160 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q89838 PATIENT 3799(12-88), CLONE 23 ACCESSORY REGION GENES, CDS -
Q74809 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
O91082 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q79277 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
O71273 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
VPR_HV1OY VPR PROTEIN (R ORF PROTEIN) - HUMAN IMMUNODEFICIENCY VIRUS T
O12160 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q71815 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
O71277 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q89677 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q89494 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q74837 COMPLETE GENOME - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
O41785 HIV-1 ISOLATE 94UG114 FROM UGANDA COMPLETE GENOME - HUMAN IM
Q79233 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q79263 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q73369 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q74784 ISOLATE LW87-2, VPR - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q79249 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q79247 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
VPR_HV1MN VPR PROTEIN (R ORF PROTEIN) - HUMAN IMMUNODEFICIENCY VIRUS T
Q79256 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
O36218 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q71944 CNTRL 2, CLONE 19, ACCESSORY REGION GENES, COMPLETE CDS - HU
O42054 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q79262 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q73332 C18MBC, COMPLETE SEQUENCE - HUMAN IMMUNODEFICIENCY VIRUS TYP
Q79267 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
O92296 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q79236 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
O89928 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q79259 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
O36212 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
O42035 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
O42036 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
O42077 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
O36208 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
O90084 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
O72615 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
P88436 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q79265 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q89588 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
P88152 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q79255 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q71938 CNTRL 2, CLONE 18, ACCESSORY REGION GENES, COMPLETE CDS - HU
Q74772 ISOLATE 1188-3, VPR - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q74773 ISOLATE 1188-4, VPR - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q79284 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
O36207 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q79268 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q79274 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
O41776 HIV-1 ISOLATE 92RW009 FROM RWANDA COMPLETE GENOME - HUMAN IM
O89935 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
O36209 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q79282 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q74781 ISOLATE LIFI-1, VPR - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q74776 ISOLATE 890-14, VPR - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
O70898 HIV-1 ISOLATE 90CR056 FROM CENTRAL AFRICAN REPUBLIC, COMPLET
Q97061 STRAIN CM240, COMPLETE PROVIRAL GENOME - HUMAN IMMUNODEFICIE
Q79254 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
O91897 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q72500 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q77693 VPR POLYPROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
VPR_HV1SC VPR PROTEIN (R ORF PROTEIN) - HUMAN IMMUNODEFICIENCY VIRUS T
Q74780 ISOLATE 896-2, VPR - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q79258 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
O36204 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q74777 ISOLATE 891-1, VPR - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q74779 ISOLATE 894-2, VPR - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q77375 VPR POLYPROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q89467 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
O91140 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
P88434 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q89493 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
O90066 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q76577 (CLONE PNL432) PROVIRAL VPR RNA, COMPLETE CDS - HUMAN IMMUNO
O91148 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
O90059 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q75004 VPR - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
VPR_SIVCZ VPR PROTEIN (R ORF PROTEIN) - CHIMPANZEE IMMUNODEFICIENCY VI
VPR_HV1B1 VPR PROTEIN (R ORF PROTEIN) - HUMAN IMMUNODEFICIENCY VIRUS T
VPR_HV1B5 VPR PROTEIN (R ORF PROTEIN) - HUMAN IMMUNODEFICIENCY VIRUS T
P89694 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
O91136 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
O91152 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q79668 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
O36211 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
P89843 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q74778 ISOLATE 894-1, VPR - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
O91132 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
O91162 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
O91166 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
O91144 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
O91170 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
O91180 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
VPR_SIVS4 VPR PROTEIN (R ORF PROTEIN) - SIMIAN IMMUNODEFICIENCY VIRUS
O11785 VPR PROTEIN - CHIMPANZEE IMMUNODEFICIENCY VIRUS (SIV(CPZ)) (
Q07392 VPR PROTEIN (R ORF PROTEIN) - CHIMPANZEE IMMUNODEFICIENCY VI
Q88017 VPR PROTEIN - CHIMPANZEE IMMUNODEFICIENCY VIRUS (SIV(CPZ)) (
VPR_SIVMK VPR PROTEIN (R ORF PROTEIN) - SIMIAN IMMUNODEFICIENCY VIRUS
VPR_SIVML VPR PROTEIN (R ORF PROTEIN) - SIMIAN IMMUNODEFICIENCY VIRUS
Q85605 R (AA 1-97) - HUMAN T-CELL LYMPHOTROPIC VIRUS TYPE 4.
VPR_SIVSP VPR PROTEIN (R ORF PROTEIN) - SIMIAN IMMUNODEFICIENCY VIRUS
Q89638 VPR PROTEIN - CHIMPANZEE IMMUNODEFICIENCY VIRUS (SIV(CPZ)) (
P89157 STRAIN SIVSME543, COMPLETE GENOME - CHIMPANZEE IMMUNODEFICIE
VPR_SIVM1 VPR PROTEIN (R ORF PROTEIN) - SIMIAN IMMUNODEFICIENCY VIRUS
Q04270 VPR PROTEIN (R ORF PROTEIN) - CHIMPANZEE IMMUNODEFICIENCY VI
O57061 VPR PROTEIN - CHIMPANZEE IMMUNODEFICIENCY VIRUS (SIV(CPZ)) (
Q88146 VPR PROTEIN - CHIMPANZEE IMMUNODEFICIENCY VIRUS (SIV(CPZ)) (
O90320 VPR - CHIMPANZEE IMMUNODEFICIENCY VIRUS (SIV(CPZ)) (CIV).
O12332 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 2.
Q87957 VPR PROTEIN - CHIMPANZEE IMMUNODEFICIENCY VIRUS (SIV(CPZ)) (
Q87966 VPR PROTEIN - CHIMPANZEE IMMUNODEFICIENCY VIRUS (SIV(CPZ)) (
Q76624 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 2.
VPR_HV2D2 VPR PROTEIN (R ORF PROTEIN) - HUMAN IMMUNODEFICIENCY VIRUS T
VPR_HV2SB VPR PROTEIN (R ORF PROTEIN) - HUMAN IMMUNODEFICIENCY VIRUS T
Q76637 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 2.
VPR_HV2NZ VPR PROTEIN (R ORF PROTEIN) - HUMAN IMMUNODEFICIENCY VIRUS T
VPR_HV2CA VPR PROTEIN (R ORF PROTEIN) - HUMAN IMMUNODEFICIENCY VIRUS T
VPR_HV2BE VPR PROTEIN (R ORF PROTEIN) - HUMAN IMMUNODEFICIENCY VIRUS T
VPR_HV2RO VPR PROTEIN (R ORF PROTEIN) - HUMAN IMMUNODEFICIENCY VIRUS T
Q74231 TRANSCRIPTIONAL ACTIVATOR - HUMAN IMMUNODEFICIENCY VIRUS TYP
VPR_HV2D1 VPR PROTEIN (R ORF PROTEIN) - HUMAN IMMUNODEFICIENCY VIRUS T
VPR_HV2G1 VPR PROTEIN (R ORF PROTEIN) - HUMAN IMMUNODEFICIENCY VIRUS T
VPR_HV2KR VPR PROTEIN (R ORF PROTEIN) - HUMAN IMMUNODEFICIENCY VIRUS T
VPR_HV2ST VPR PROTEIN (R ORF PROTEIN) - HUMAN IMMUNODEFICIENCY VIRUS T
Q88101 (CLONE 2) GAG, POL, VIF, VPR, TAT, REV, ENVELOPE (ENV) AND N
O12384 VPR (VPR) - CHIMPANZEE IMMUNODEFICIENCY VIRUS (SIV(CPZ)) (CI
O12383 VPR (VPR) - CHIMPANZEE IMMUNODEFICIENCY VIRUS (SIV(CPZ)) (CI
VPX_SIVA1 VPX PROTEIN (X ORF PROTEIN) - SIMIAN IMMUNODEFICIENCY VIRUS
Q87110 VPX PROTEIN - CHIMPANZEE IMMUNODEFICIENCY VIRUS (SIV(CPZ)) (
VPX_SIVM1 VPX PROTEIN (X ORF PROTEIN) - SIMIAN IMMUNODEFICIENCY VIRUS
Q89552 CLONE 1A11 SEQUENCE - CHIMPANZEE IMMUNODEFICIENCY VIRUS (SIV
Q88064 (MM316O) DNA, COMPLETE CDS'S - CHIMPANZEE IMMUNODEFICIENCY V
Q88050 (MM316X) DNA, COMPLETE CDS'S - CHIMPANZEE IMMUNODEFICIENCY V
Q88020 (MM316ZA) DNA, COMPLETE CDS'S - CHIMPANZEE IMMUNODEFICIENCY
Q07393 VPX PROTEIN (X ORF PROTEIN) - CHIMPANZEE IMMUNODEFICIENCY VI
Q04273 VPX PROTEIN (X ORF PROTEIN) - CHIMPANZEE IMMUNODEFICIENCY VI
Q85604 X (AA 1-112) - HUMAN T-CELL LYMPHOTROPIC VIRUS TYPE 1, AND S
VPX_SIVML VPX PROTEIN (X ORF PROTEIN) - SIMIAN IMMUNODEFICIENCY VIRUS
VPX_SIVMK VPX PROTEIN (X ORF PROTEIN) - SIMIAN IMMUNODEFICIENCY VIRUS
Q88057 (MM316K) DNA, COMPLETE CDS'S - CHIMPANZEE IMMUNODEFICIENCY V
VPX_HV2G1 VPX PROTEIN (X ORF PROTEIN) (VIRAL ACCESSORY PROTEIN) - HUMA
Q88068 (MM316Q) DNA, COMPLETE CDS'S - CHIMPANZEE IMMUNODEFICIENCY V
VPX_SIVAG VPX PROTEIN (X ORF PROTEIN) - SIMIAN IMMUNODEFICIENCY VIRUS
VPX_HV2D1 VPX PROTEIN (X ORF PROTEIN) (VIRAL ACCESSORY PROTEIN) - HUMA
Q89721 EHO, COMPLETE GENOME - HUMAN IMMUNODEFICIENCY VIRUS TYPE 2.
Q87481 D30 VPR (VPR) - CHIMPANZEE IMMUNODEFICIENCY VIRUS (SIV(CPZ))
VPX_HV2BE VPX PROTEIN (X ORF PROTEIN) (VIRAL ACCESSORY PROTEIN) - HUMA
P88144 VPX PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 2.
VPX_SIVAT VPX PROTEIN (X ORF PROTEIN) - SIMIAN IMMUNODEFICIENCY VIRUS
Q88058 (MM316L) DNA, COMPLETE CDS'S - CHIMPANZEE IMMUNODEFICIENCY V
Q87483 D42 VPR (VPR) - CHIMPANZEE IMMUNODEFICIENCY VIRUS (SIV(CPZ))
VPX_SIVAI VPX PROTEIN (X ORF PROTEIN) - SIMIAN IMMUNODEFICIENCY VIRUS
VPX_HV2ST VPX PROTEIN (X ORF PROTEIN) (VIRAL ACCESSORY PROTEIN) - HUMA
VPX_HV2CA VPX PROTEIN (X ORF PROTEIN) (VIRAL ACCESSORY PROTEIN) - HUMA
VPX_SIVS4 VPX PROTEIN (X ORF PROTEIN) - SIMIAN IMMUNODEFICIENCY VIRUS
Q88145 VPX PROTEIN - CHIMPANZEE IMMUNODEFICIENCY VIRUS (SIV(CPZ)) (
VPX_HV2KR VPX PROTEIN (X ORF PROTEIN) (VIRAL ACCESSORY PROTEIN) - HUMA
O90319 VPX - CHIMPANZEE IMMUNODEFICIENCY VIRUS (SIV(CPZ)) (CIV).
VPX_HV2SB VPX PROTEIN (X ORF PROTEIN) (VIRAL ACCESSORY PROTEIN) - HUMA
P89156 STRAIN SIVSME543, COMPLETE GENOME - CHIMPANZEE IMMUNODEFICIE
Q76623 VPX PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 2.
VPX_HV2RO VPX PROTEIN (X ORF PROTEIN) (VIRAL ACCESSORY PROTEIN) - HUMA
Q89827 VPX PROTEIN - CHIMPANZEE IMMUNODEFICIENCY VIRUS (SIV(CPZ)) (
O90275 VIRAL PROTEIN R - CHIMPANZEE IMMUNODEFICIENCY VIRUS (SIV(CPZ
VPX_HV2D2 VPX PROTEIN (X ORF PROTEIN) (VIRAL ACCESSORY PROTEIN) - HUMA
Q76636 VPX PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 2.
Q88137 VPX PROTEIN - CHIMPANZEE IMMUNODEFICIENCY VIRUS (SIV(CPZ)) (
VPX_SIVSP VPX PROTEIN (X ORF PROTEIN) - SIMIAN IMMUNODEFICIENCY VIRUS
Q88125 VPX PROTEIN - CHIMPANZEE IMMUNODEFICIENCY VIRUS (SIV(CPZ)) (
Q88131 VPX PROTEIN - CHIMPANZEE IMMUNODEFICIENCY VIRUS (SIV(CPZ)) (
VPR_SIVGB VPR PROTEIN (R ORF PROTEIN) - SIMIAN IMMUNODEFICIENCY VIRUS
O36214 VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
O90175 TRUNCATED VPR PROTEIN - HUMAN IMMUNODEFICIENCY VIRUS TYPE 1.
Q87624 GAG - CHIMPANZEE IMMUNODEFICIENCY VIRUS (SIV(CPZ)) (CIV).
VPX_HV2NZ VPX PROTEIN (X ORF PROTEIN) (VIRAL ACCESSORY PROTEIN) - HUMA
DYHC_PARTE DYNEIN HEAVY CHAIN, CYTOSOLIC (DYHC) - PARAMECIUM TETRAURELI
SCAN HISTORY
OWL26_3 3 150 NSINGLE
SPTR37_9f 3 600 NSINGLE
INITIAL MOTIF SETS
HIVVPRVPX1 Length of motif = 14 Motif number = 1
VPR/VPX motif I - 1
PCODE ST INT
EWTLELLEELKREA VPR_HV1A2 17 17
EWTLELLEELKNEA VPR_HV1B1 17 17
EWTLELLEELKSEA HIVNY5CG3 17 17
EWVVEVLEELKEEA VPR_SIVML 18 18
KWLRDMLQDLNQEA VPX_SIVAT 27 27
AWLERTITELNRVA VPX_HV2D2 22 22
EWLQDMLRDLNEEA VPX_SIVAI 27 27
EWLERTIEALNREA VPX_HV2BE 23 23
HIVVPRVPX2 Length of motif = 16 Motif number = 2
VPR/VPX motif II - 1
PCODE ST INT
AVRHFPRPWLHSLGQY VPR_HV1A2 30 -1
AVRHFPRIWLHGLGQH VPR_HV1B1 30 -1
AVRHFPRIWLHNLGQH HIVNY5CG3 30 -1
ALKHFDPRLLTALGNH VPR_SIVML 31 -1
ARLHFGRELLFQVWNY VPX_SIVAT 40 -1
AVNHLPRELIFQVWQR VPX_HV2D2 35 -1
ARRHFGMNMLIRVWNY VPX_SIVAI 40 -1
AVNHLPRELIFQVWQR VPX_HV2BE 36 -1
HIVVPRVPX3 Length of motif = 17 Motif number = 3
VPR/VPX motif III - 1
PCODE ST INT
IIRILQQLLFIHFRIGC VPR_HV1A2 60 14
IIRILQQLLFIHFQNWV VPR_HV1B1 60 14
IIRILQQLLFIHFRIGC HIVNY5CG3 60 14
LIRILQRALFMHFRGGC VPR_SIVML 61 14
YYRLVQKALFVHFRCGC VPX_SIVAT 74 18
YLLLMQKAMFVHYTKGC VPX_HV2D2 70 19
YYRIVQKSMFVHFRCGC VPX_SIVAI 74 18
YLCLMQKAIFTHFKRGC VPX_HV2BE 71 19
FINAL MOTIF SETS
HIVVPRVPX1 Length of motif = 14 Motif number = 1
VPR/VPX motif I - 3
PCODE ST INT
EWTLELLEELKNEA O42071 17 17
EWTLELLEELKNEA VPR_HV1BR 17 17
EWTLELLEELKNEA Q79252 17 17
EWTLELLEELKNEA Q79248 17 17
EWTLELLEELKNEA Q79245 17 17
EWTLELLEELKNEA Q79238 17 17
EWTLELLEELKNEA O71267 17 17
EWTLELLEELKNEA O71254 17 17
EWTLELLEELKNEA O73196 17 17
EWTLELLEELKNEA Q71999 17 17
EWTLELLEELKNEA Q79241 17 17
EWTLELLEELKNEA Q79243 17 17
EWTLELLEELKNEA Q79275 17 17
EWTLELLEELKNEA O71258 17 17
EWTLELLEELKNEA O91890 17 17
EWTLELLEELKNEA O36203 17 17
EWTLELLEELKNEA Q74775 17 17
EWTLELLEELKSEA Q74785 17 17
EWTLELLEELKSEA Q79251 17 17
EWTLELLEELKSEA Q74786 17 17
EWTLELLEELKNEA O36217 17 17
EWTLELLEELKSEA Q79234 17 17
EWTLELLEELKSEA Q79279 17 17
EWTLELLEELKSEA Q79672 17 17
EWTLELLEELKSEA O40218 17 17
EWTLELLEELKNEA VPR_HV1JR 17 17
EWTLELLEELKNEA Q89636 17 17
EWTLELLEELKNEA Q79788 17 17
EWTLELLEELKNEA Q72014 17 17
EWTLELLEELKNEA Q71881 17 17
EWTLELLEELKNEA O41800 17 17
EWTLELLEELKREA Q72981 17 17
EWTLELLEELKREA Q72989 17 17
EWTLELLEELKREA VPR_HV1Y2 17 17
EWTLELLEELKNEA Q79264 17 17
EWTLELLEELKSEA Q71931 17 17
EWTLELLEELKSEA Q71925 17 17
EWTLELLEELKSEA Q71911 17 17
EWTLELLEELKSEA Q71904 17 17
EWTLELLEELKSEA Q71897 17 17
EWTLELLEELKSEA O42045 17 17
EWTLELLEELKSEA O36216 17 17
EWTLELLEELKSEA O36210 17 17
EWTLELLEELKNEA Q79235 17 17
EWTLELLEELKXEA Q79271 17 17
EWTLELLEELKSEA Q79242 17 17
EWTLELLEELKSEA O41768 17 17
EWTLELLEELKSEA P87921 17 17
EWTLELLEELKNEA Q75757 17 17
EWALELLEELKNEA Q79257 17 17
EWTLELLEELKSEA Q79793 17 17
EWTLELLEELKSEA VPR_HV1N5 17 17
EWTLELLEELKTEA O71972 17 17
EWTLELLEELKSEA O42084 17 17
EWTLELLEELKSEA VPR_HV1RH 17 17
EWTLELLEELKSEA O70893 17 17
EWALELLEELKNEA Q79269 17 17
EWTLELLEELKREA VPR_HV1A2 17 17
EWTLELLEELKGEA O71967 17 17
EWTLELLEELKQEA O90092 17 17
EWTLELLEELKQEA O90100 17 17
EWTLELLEELKSEA Q79260 17 17
EWTLELLEELKNEA Q79281 17 17
EWALELLEELKNEA Q79276 17 17
EWTLELLEELKNEA Q79239 17 17
EWALELLEELKSEA VPR_HV1EL 17 17
EWTLELLEELKNEA O36202 17 17
EWTLELLEELKNEA O36205 17 17
EWTLELLEELKNEA O36206 17 17
EWALELLEELKNEA Q79273 17 17
EWTLELLEELKSEA O36213 17 17
EWALELLEELKNEA O89942 17 17
EWTLELLEELKSEA Q71918 17 17
EWTLELLEELKNEA O36215 17 17
EWTLELLEELKNEA Q79237 17 17
EWTLELLEELKREA Q72492 17 17
EWTLELLEELKHEA Q79270 17 17
EWTLELLEELKREA O70676 17 17
EWALELLEELKNEA Q79280 17 17
EWTLELLEELKNEA P88158 17 17
EWTLELLEELKSEA VPR_HV1Z2 17 17
EWALELLEELKNEA O71263 17 17
EWTLELLEELKNEA Q79253 17 17
EWTLELLEELKNEA O42058 17 17
EWTLELLEELKHEA Q74455 17 17
EWTLELLEELKHEA O72610 17 17
EWTLELLEELKQEA VPR_HV1MA 17 17
EWTLELLEELKNEA Q79244 17 17
EWTLDLLEELKNEA O70888 17 17
EWTLELLEELKQEA O90075 17 17
EWTLELLEELKTEA Q79246 17 17
EWALELLEELKNEA Q79266 17 17
EWALELLEELKNEA Q79278 17 17
EWTLELLEELKNEA O90160 17 17
EWTLELLEELKNEA Q89838 17 17
EWTLELLEELKSEA Q74809 17 17
EWALELLEELKNEA O91082 17 17
EWTLELLEELKNEA Q79277 17 17
EWTLELLEELKNEA O71273 17 17
EWTLELLEELKSEA VPR_HV1OY 17 17
EWTLELLEELKREA O12160 17 17
EWTLELLEELKSEA Q71815 17 17
EWALELLEELKSEA O71277 17 17
EWTLELLEELKNEA Q89677 17 17
EWTLELLEELKNEA Q89494 17 17
AWTLELLEELKSEA Q74837 17 17
EWTLELLEELKSEA O41785 17 17
EWTLELLEELKSEA Q79233 17 17
AWALELLEELKNEA Q79263 17 17
DWTLELLEELKNEA Q73369 17 17
EWALELLEDLKNEA Q74784 17 17
EWTLELLEDLKNEA Q79249 17 17
EWTLELLEELKNEA Q79247 17 17
QWALELLEELKNEA VPR_HV1MN 17 17
EWALELLEXLKNEA Q79256 17 17
EWTLELLEELKSKA O36218 17 17
EWTLELLEELKNEA Q71944 17 17
EWTLELLEELKNEA O42054 17 17
EWALELLEELKNEA Q79262 13 13
EWTLELLEELKNEA Q73332 17 17
EWALEILEELKNEA Q79267 17 17
AWTLELLEELKREA O92296 17 17
EWTLELLEELKNEA Q79236 17 17
EWALELLEGLKNEA O89928 17 17
EWALELLEELKNEA Q79259 17 17
EWTLELLEELKSEA O36212 17 17
EWTLELLEELKSEA O42035 17 17
EWTLELLEELKSEA O42036 17 17
EWTLELLEELKSEA O42077 17 17
DWTLELLEELKNEA O36208 17 17
EWTLELLEELKQEA O90084 17 17
EWTVELLEELKHEA O72615 17 17
EWTLELLEELKNEA P88436 17 17
EWALELLEELKNEA Q79265 17 17
EWALELLEDLKTEA Q89588 17 17
EWTLELLEELKTEA P88152 17 17
EWALELLEELKSEA Q79255 17 17
AWTLELLEELKSEA Q71938 17 17
AWTLELLEELKSEA Q74772 17 17
AWTLELLEELKSEA Q74773 17 17
EWALELLEELKNEA Q79284 17 17
EWTLELLEELKNEA O36207 17 17
EWTLELLEELKNEA Q79268 17 17
EWALELLGELKNEA Q79274 17 17
EWTLELLEALKQEA O41776 17 17
EWALELLEGLKNEA O89935 17 17
EWTLELLEELRSEA O36209 17 17
EWTLELLEELKNEA Q79282 17 17
EWALELLEDLKTEA Q74781 17 17
EWALELLEDLKTEA Q74776 17 17
EWTLELLEEIKNEA O70898 17 17
EWTLELLEELKNEA Q97061 16 16
EWTLELLEELKNEA Q79254 17 17
EWTLELLEELKNEA O91897 17 17
EWTLELLEELKSEA Q72500 17 17
EWTLELLEELKSEA Q77693 17 17
EWTLELLRKLKSEA VPR_HV1SC 17 17
EWTLELLEDLKTEA Q74780 17 17
QWALELLEELKNEA Q79258 17 17
EWTLELLEELKNEA O36204 17 17
EWTLELLEELKSEA Q74777 17 17
EWALELLEDLKTEA Q74779 17 17
EWALELLEELKAEA Q77375 17 17
EWRLELLEELKNEA Q89467 17 17
EWTLELLEELKTEA O91140 17 17
EWTLELLEELKSEA P88434 17 17
EWALELLEDLKTEA Q89493 17 17
AWALELLEELKQEA O90066 17 17
EWTLELLEELKSEA Q76577 17 17
EWALKLLEELKAEA O91148 17 17
EWTLELLEDLKQEA O90059 17 17
EWALELLEELKQEA Q75004 17 17
EWALETLEELKNEA VPR_SIVCZ 17 17
EWTLELLEELKNEA VPR_HV1B1 17 17
EWTLELLEELKNEA VPR_HV1B5 17 17
EWMLDLLEDLKHEA P89694 17 17
EWALELLEELKAEA O91136 17 17
EWALEVLEELKAEA O91152 17 17
EWTLELLEELKEEA Q79668 17 17
ERTLELLEELKSEA O36211 17 17
DWVLELLEELKQEA P89843 17 17
EWALELLEDLKTEA Q74778 17 17
EWTLELLEELKQEA O91132 17 17
EWALELLEELKEEA O91162 17 17
EWALETLEEIKAEA O91166 17 17
AWTLELLEELKAEA O91144 17 17
EWTLELLEELKAEA O91170 17 17
EWALETLEELKAEA O91180 17 17
EWVVEVLEELKEEA VPR_SIVS4 18 18
EWVVEVLEELKEEA O11785 18 18
EWVVEVLEELKEEA Q07392 18 18
EWVVEVLEELKEEA Q88017 18 18
EWVVEVLEELKEEA VPR_SIVMK 18 18
EWVVEVLEELKEEA VPR_SIVML 18 18
EWVVEVLEELKEEA Q85605 18 18
EWVVEVLEEIKEEA VPR_SIVSP 18 18
EWVVEVLEEIKEEA Q89638 18 18
EWVVEVLEEIKEEA P89157 18 18
EWVVEVLKELKEEA VPR_SIVM1 18 18
EWVVEVLEELKEEA Q04270 18 18
EWVVEVLEELKEEA O57061 18 18
EWVVEVLEEIKQEA Q88146 18 18
EWVVKVLEEVKEEA O90320 18 18
EWVIEILREIQEEA O12332 22 22
EWVVEVLEERKEEA Q87957 18 18
EWVVEVLEEXKEEA Q87966 18 18
EWVIEILREITEEA Q76624 22 22
EWIGEILEEIKQEA VPR_HV2D2 22 22
EWVIEILREIKEEA VPR_HV2SB 22 22
EWVEDVMEEIKQEA Q76637 22 22
AWVIEILREIEEEA VPR_HV2NZ 22 22
EWVIEILRDIKEEA VPR_HV2CA 22 22
DWVIETLREIKEEA VPR_HV2BE 22 22
EWIIEILREIKEEA VPR_HV2RO 22 22
QWVVDVLEEIKQEA Q74231 47 47
TWVIETLKEIKEEA VPR_HV2D1 22 22
DWVIRILGEIKEEA VPR_HV2G1 22 22
EWVIGILRELREEA VPR_HV2KR 22 22
EWVIETLREIKEAL VPR_HV2ST 22 22
EWLRDMLEDLNQEA Q88101 27 27
EWLRDMLAELNREA O12384 27 27
EWLRDMLTELNQEA O12383 27 27
EWLRDMVEEINNEA VPX_SIVA1 27 27
EWLRDMLQDLNSEA Q87110 42 42
EWLNRTVEEINREA VPX_SIVM1 23 23
EWLNRTVEEINREA Q89552 23 23
EWLNRTVEEINREA Q88064 23 23
EWLNRTVEEINREA Q88050 23 23
EWLNRTVEEINREA Q88020 23 23
EWLNRTVEEINREA Q07393 23 23
EWLNRTVEEINREA Q04273 23 23
EWLNRTVEEINREA Q85604 23 23
EWLNRTVEEINREA VPX_SIVML 23 23
EWLNRTVEEINREA VPX_SIVMK 23 23
EWLNRTVEEINREA Q88057 23 23
EWLDRTIEALNREA VPX_HV2G1 23 23
EWLNRTVEEINREA Q88068 23 23
EWLRDMLEDINQEA VPX_SIVAG 27 27
EWLDRTIEALNREA VPX_HV2D1 23 23
EWLETTLEHLNRVA Q89721 22 22
EWLRDMLQDLNQEA Q87481 42 42
EWLERTIEALNREA VPX_HV2BE 23 23
EWLDRTIEALNREA P88144 23 23
KWLRDMLQDLNQEA VPX_SIVAT 27 27
EWLNRTVEEINREA Q88058 23 23
EWLRDMLQDLNQEA Q87483 42 42
EWLQDMLRDLNEEA VPX_SIVAI 27 27
EWLDRTVEAINREA VPX_HV2ST 23 23
AWLDRTVEAINREA VPX_HV2CA 23 23
EWLNRTVEEINRAA VPX_SIVS4 23 23
EWLHRTVEDINREA Q88145 23 23
AWLERMVEAINREA VPX_HV2KR 23 23
EWLNRTVEEINRAA O90319 23 23
DWLDRTVEAINREA VPX_HV2SB 23 23
EWLNRTVEGINRAA P89156 23 23
AWLDRTVEAINREA Q76623 23 23
AWLNRTVEAINREA VPX_HV2RO 23 23
DWLHRTXEEINRAA Q89827 23 23
QWLADTMEEIKEEA O90275 26 26
AWLERTITELNRVA VPX_HV2D2 22 22
DWLERTITELNRVA Q76636 22 22
DWLDRTVEEINRAA Q88137 23 23
DWLDRTVEEINRAA VPX_SIVSP 23 23
DWLHRTVEEINRAA Q88125 23 23
DWLHRTVEEINRAA Q88131 23 23
QWLADTMEEIKEEA VPR_SIVGB 22 22
HIVVPRVPX2 Length of motif = 16 Motif number = 2
VPR/VPX motif II - 3
PCODE ST INT
AVRHFPRIWLHGLGQH O42071 30 -1
AVRHFPRIWLHGLGQH VPR_HV1BR 30 -1
AVRHFPRIWLHGLGQH Q79252 30 -1
AVRHFPRIWLHGLGQH Q79248 30 -1
AVRHFPRIWLHGLGQH Q79245 30 -1
AVRHFPRIWLHGLGQH Q79238 30 -1
AVRHFPRIWLHGLGQH O71267 30 -1
AVRHFPRIWLHGLGQH O71254 30 -1
AVRHFPRIWLHSLGQH O73196 30 -1
AVRHFPRIWLHSLGQH Q71999 30 -1
AVRHFPRIWLHSLGQH Q79241 30 -1
AVRHFPRIWLHSLGQH Q79243 30 -1
AVRHFPRIWLHSLGQH Q79275 30 -1
AVRHFPRPWLHGLGQH O71258 30 -1
AVRHFPRPWLHGLGQH O91890 30 -1
AVRHFPRPWLHSLGQH O36203 30 -1
AVRHFPRPWLHSLGQH Q74775 30 -1
AVRHFPRIWLHGLGQH Q74785 30 -1
AVRHFPRIWLHGLGQH Q79251 30 -1
AVRHFPRIWLHGLGQH Q74786 30 -1
AVRHFPRVWLHGLGQH O36217 30 -1
AVRHFPRIWLHSLGQH Q79234 30 -1
AVRHFPRIWLHSLGQH Q79279 30 -1
AVRHFPRIWLHSLGQH Q79672 30 -1
AVRHFPRPWLHGLGQH O40218 30 -1
AVRHFPRIWLHSLGQY VPR_HV1JR 30 -1
AVRHFPRIWLHSLGQY Q89636 30 -1
AVRHFPRIWLHSLGQY Q79788 30 -1
AVRHFPRIWLHSLGQY Q72014 30 -1
AVRHFPRIWLHSLGQY Q71881 30 -1
AVRHFPRPWLHGLGQY O41800 30 -1
AVRHFPRPWLHGLGQH Q72981 30 -1
AVRHFPRPWLHGLGQH Q72989 30 -1
AVRHFPRPWLHGLGQH VPR_HV1Y2 30 -1
AVRHFPRPWLHSLGQY Q79264 30 -1
AVRHFPRVWLHGLGQH Q71931 30 -1
AVRHFPRVWLHGLGQH Q71925 30 -1
AVRHFPRVWLHGLGQH Q71911 30 -1
AVRHFPRVWLHGLGQH Q71904 30 -1
AVRHFPRVWLHGLGQH Q71897 30 -1
AVRHFPRVWLHGLGQH O42045 30 -1
AVRHFPRVWLHGLGQH O36216 30 -1
AVRHFPRVWLHGLGQH O36210 30 -1
AVRHFPRRWLHGLGQY Q79235 30 -1
AVRHFPRIWLHGLGQH Q79271 30 -1
AVRHFPRIWLHSLGQY Q79242 30 -1
AVRHFPRIWLHSLGQY O41768 30 -1
AVRHFPRVWLHSLGQH P87921 30 -1
AVRHFPRVWLHSLGQY Q75757 30 -1
AVRHFPRIWLHGLGQH Q79257 30 -1
AVRHFPRIWLHNLGQH Q79793 30 -1
AVRHFPRIWLHNLGQH VPR_HV1N5 30 -1
AVRHFPRPWLHSLGQH O71972 30 -1
AVRHFPRLWLHSLGQH O42084 30 -1
AVRHFPRLWLHSLGQH VPR_HV1RH 30 -1
AVRHFPRLWLHSLGQH O70893 30 -1
AVRHFPRIWLHSLGQH Q79269 30 -1
AVRHFPRPWLHSLGQY VPR_HV1A2 30 -1
AVRHFPRPWLHSLGQH O71967 30 -1
AVRHFPRPWLHGLGQY O90092 30 -1
AVRHFPRPWLHGLGQY O90100 30 -1
AVRHFPRIWLHSLGQH Q79260 30 -1
AVRHFPRIWLHSLGQH Q79281 30 -1
AVRHFPRVWLHGLGQH Q79276 30 -1
AVRHFPRLWLHDLGQH Q79239 30 -1
AVRHFPRIWLHSLGQH VPR_HV1EL 30 -1
AVRHFPRPWLHSLGQH O36202 30 -1
AVRHFPRPWLHSLGQH O36205 30 -1
AVRHFPRPWLHSLGQH O36206 30 -1
AVRHFPRVWLHSLGQH Q79273 30 -1
AVRHFPRIWLHGLGQH O36213 30 -1
AVRHFPRLWLHGLGQH O89942 30 -1
AVRHFPRVWLHGLGQH Q71918 30 -1
AVRHFPRVWLHGLGQH O36215 30 -1
AVRHFPRVWLHGLGQH Q79237 30 -1
AVRHFPRLWLHSLGQY Q72492 30 -1
AVRHFPRTWLHSLGQH Q79270 30 -1
AVRHFPRIWLHGLGQH O70676 30 -1
AVRHFPRXWLHGLGQH Q79280 30 -1
AVRHFPRPWLHGLGQY P88158 30 -1
AVRHFPRIWLHSLGQY VPR_HV1Z2 30 -1
AVRHFPRVWLHGLGQY O71263 30 -1
AVRHFPRMWLHSLGQY Q79253 30 -1
AVRHFPRPWLHGLGLH O42058 30 -1
AVRHFPRPWLHGLGQH Q74455 30 -1
AVRHFPRPWLHGLGQH O72610 30 -1
AVRHFPRIWLHSLGQH VPR_HV1MA 30 -1
AVRHFPRIWLHSLGQH Q79244 30 -1
AVRHFPRPWLHSLGQH O70888 30 -1
AVRHFPRPWLHGLGQY O90075 30 -1
AVRHFPRVWLHNLGQY Q79246 30 -1
AVRHFPRIWLHSLGQH Q79266 30 -1
AVRHFPRXWLHGLGQH Q79278 30 -1
AVRHFPRPWLHGLGQY O90160 30 -1
AVRHFPRIWLHSLGQY Q89838 30 -1
AVRHFPRIWLHSLGQH Q74809 30 -1
AVRHFPRIWLHGLGQH O91082 30 -1
AVRHFPRTWLHGLGQY Q79277 30 -1
AVRHFPRVWLHGLGQH O71273 30 -1
AVRHFPRIWLHSLEQY VPR_HV1OY 30 -1
AVRHFPRPWLHGLGQH O12160 30 -1
AVRHFPRIWLHSLGQY Q71815 30 -1
AVRHFPRVWLHGLGQH O71277 30 -1
AVKHFPRLWLHSLGQH Q89677 30 -1
AVKHFPRLWLHSLGQH Q89494 30 -1
AVRHFPRIWLHSLGQY Q74837 30 -1
AVRHFPGPWLHSLGQY O41785 30 -1
AVRHFPRGWLHNLGQH Q79233 30 -1
AVRHFPRIWLHGLGQH Q79263 30 -1
AVRHFPRIWLHSLGQH Q73369 30 -1
AVRHFPRIWLHSLGQH Q74784 30 -1
AVRHFPRVWLHNLGQH Q79249 30 -1
AARHFPRIWLHGLGQH Q79247 30 -1
AVRHFPRIWLHGLGQH VPR_HV1MN 30 -1
AVRHFPRIWLHGLGQH Q79256 30 -1
AVRHFPRVWLHGLGQH O36218 30 -1
AVRHFPRRWLHDLGQY Q71944 30 -1
AVRHFPRPWLHSLGQH O42054 30 -1
AVRHFPREWLHSLGQY Q79262 26 -1
AVRHFPRVWLHGLGQH Q73332 30 -1
AVRHFPRMWLHGLGQH Q79267 30 -1
AVRHFPRPWLHSLGQY O92296 30 -1
AVKHFPRNWLHGLGQH Q79236 30 -1
AVRHFPRPWLHGLGQH O89928 30 -1
AVRHFPRIWLHGLGQY Q79259 30 -1
AVRHFPWIWLHGLGQH O36212 30 -1
AVRHFPWIWLHGLGQH O42035 30 -1
AVRHFPWIWLHGLGQH O42036 30 -1
AVRHFPWIWLHSLGQH O42077 30 -1
AVRHFPRPWLHSLGQH O36208 30 -1
AVRHFPRPWLHGLGQY O90084 30 -1
AVRHFPRPWLHGLGQH O72615 30 -1
AVRHFPGPWLHGLGQY P88436 30 -1
AVXHFPRVWLHGLGQH Q79265 30 -1
AVRHFPRIWLHSLGQH Q89588 30 -1
AVRHFPRPWLHGLGKH P88152 30 -1
AVRHFPRIWLHSLGQY Q79255 30 -1
AVRHFPRRWLHDLGQY Q71938 30 -1
AVRHFPRIWLHGLGQY Q74772 30 -1
AVRHFPRIWLHGLGQY Q74773 30 -1
AVRHFPRTWLHGLGQH Q79284 30 -1
AVRHFPRVWLHSLGQH O36207 30 -1
AVRHFPRVWLHSLGQH Q79268 30 -1
AVRHFPRAWLHSLGQH Q79274 30 -1
AVRHFPRPWLHDLGQY O41776 30 -1
AVRHFPRPWLHGLGQH O89935 30 -1
AVRHFPRVWLHGLGQH O36209 30 -1
AVRHFPRTWLHGLGQY Q79282 30 -1
AVRHFPRIWLHSLGQY Q74781 30 -1
AVRHFPRIWLHSLGQY Q74776 30 -1
AVRHFPRVWLHQLGQH O70898 30 -1
AVRHFPRPWLQGLGQY Q97061 29 -1
AVRHFSGPWLHGLGQY Q79254 30 -1
AVRHFPWTWLHGLGQY O91897 30 -1
AVRHFPRIWLHNLGRH Q72500 30 -1
AVRHFPRPWLLALGQH Q77693 30 -1
AVRHFPRIWLHGLGQH VPR_HV1SC 30 -1
AVWHFPRIWLHSLGQY Q74780 30 -1
AVRHFPRMWLHGLGQH Q79258 30 -1
AVRHFPRVWLHSLGQH O36204 30 -1
AVKHFPRIWLHGLGRH Q74777 30 -1
AVGHFPRIWLHSLGQH Q74779 30 -1
AVRHFPRPWLHALGQY Q77375 30 -1
AVKHFPRLWLHSLGQH Q89467 30 -1
AVRHFPRPWLMSLGQY O91140 30 -1
ALRHFPGPWLHGLGQY P88434 30 -1
ADRHFPRIWLHSLGQH Q89493 30 -1
AVRHFPRPCLHGLGQY O90066 30 -1
AVRHFPRIWLHNLGLH Q76577 30 -1
AVRHFPRPWLHALGQY O91148 30 -1
AVRHFPRPWLHGLGQY O90059 30 -1
AVRHFPRPWLHNLGQY Q75004 30 -1
AVRHFPRPWLHQLGQF VPR_SIVCZ 30 -1
AVRHFPRIWLHGLGQH VPR_HV1B1 30 -1
AVRHFPRIWLHGLGQH VPR_HV1B5 30 -1
AVRHFPRPWLHGLGQH P89694 30 -1
AVRHFPKPWLQALGQY O91136 30 -1
AVRHFPRHWLQALGQY O91152 30 -1
AVRHFPRPWLQACGQY Q79668 30 -1
AVRHFPWIWLHGLGQH O36211 30 -1
AVRHFPRQWLHGLGQH P89843 30 -1
AVRHFPRIWLHSLGQY Q74778 30 -1
AVRHFPRNWLQTLGQY O91132 30 -1
AVRHFPRPWLQACGQY O91162 30 -1
AVRHFPRPWLQSLGQY O91166 30 -1
AVRHFPGHWLHSLGQY O91144 30 -1
AVRHFPRPWLQALGQY O91170 30 -1
AVRHFPQPWLQALGNY O91180 30 -1
ALKHFDPRLLTALGNY VPR_SIVS4 31 -1
ALKHFDPRLLTALGNH O11785 31 -1
ALKHFDPRLLTALGNH Q07392 31 -1
ALKHFDPRLLTALGNH Q88017 31 -1
ALKHFDPRLLTALGNH VPR_SIVMK 31 -1
ALKHFDPRLLTALGNH VPR_SIVML 31 -1
ALKHFDPRLLTTLGNH Q85605 31 -1
ALNHFDPRLLTALGNY VPR_SIVSP 31 -1
ALNHFDPRLLTALGNY Q89638 31 -1
ALKHFDPRLLTALGNY P89157 31 -1
ALKHFDPRLLTALGNH VPR_SIVM1 31 -1
ALKHFDPRLLTALGNH Q04270 31 -1
ALKHFDPRLLTALGNY O57061 31 -1
ALRHFDPRLLSALGNY Q88146 31 -1
ALKHFDPRLLTALGNY O90320 31 -1
AVKHFDRRLLTNLGRY O12332 35 -1
ALNXFDPRLLTALGNY Q87957 31 -1
ALNXFDPRLLIALGNY Q87966 31 -1
ALKHFDRSLLTALGRH Q76624 35 -1
ALKHFDPRLLTALGNF VPR_HV2D2 35 -1
ALKHFDPRLLTALGYY VPR_HV2SB 35 -1
ALRHFDPRLLTALGNF Q76637 35 -1
ALRHFDPRLLTALGRY VPR_HV2NZ 35 -1
ALKHFDPRLLTALGGH VPR_HV2CA 35 -1
ALRHFDPRLLIALGYY VPR_HV2BE 35 -1
ALKHFDPRLLIALGKY VPR_HV2RO 35 -1
ALKHFDPRLLTALGNF Q74231 60 -1
ALKHFDPCLLIALGNY VPR_HV2D1 35 -1
ALKHFDPRLLIALGNY VPR_HV2G1 35 -1
ALKHFDPRLLTTLGNY VPR_HV2KR 35 -1
ALKHFDPRLLITLGNY VPR_HV2ST 34 -2
AKLHFGRELLFQVWNY Q88101 40 -1
AQRHFGRELLFQVWNY O12384 40 -1
AQRHFGRELLFQVWNY O12383 40 -1
AKLHFGRELLYQVWNY VPX_SIVA1 40 -1
AQCHFPRNLLFRLWWN Q87110 55 -1
AVNHLPRELIFQVWQR VPX_SIVM1 36 -1
AVNHLPRELIFQVWQR Q89552 36 -1
AVNHLPRELIFQVWQR Q88064 36 -1
AVNHLPRELIFQVWQR Q88050 36 -1
AVNHLPRELIFQVWQR Q88020 36 -1
AVNHLPRELIFQVWQR Q07393 36 -1
AVNHLPRELIFQVWQR Q04273 36 -1
AVNHLPRELIFQVWQR Q85604 36 -1
AVNHLPRELIFQVWQR VPX_SIVML 36 -1
AVNHLPRELIFQVWQR VPX_SIVMK 36 -1
AVNHLPRELIFQVWQR Q88057 36 -1
AVNHLPRELIFQVWQR VPX_HV2G1 36 -1
AVNHLPRELIFQVWQR Q88068 36 -1
AKMHFGRELLFQVWNY VPX_SIVAG 40 -1
AVNHLPRELIFQVWQR VPX_HV2D1 36 -1
AVNHLPRELIFQVWQK Q89721 35 -1
AQYHFPRNLLFRLWWN Q87481 55 -1
AVNHLPRELIFQVWQR VPX_HV2BE 36 -1
AVNHLPRELIFQVWQR P88144 36 -1
ARLHFGRELLFQVWNY VPX_SIVAT 40 -1
AVNHLPRELIFQVWQR Q88058 36 -1
AQCHFPRNLLFRLWWN Q87483 55 -1
ARRHFGMNMLIRVWNY VPX_SIVAI 40 -1
AVNHLPRELIFQVWQR VPX_HV2ST 36 -1
AVNHLPRELIFQVWQR VPX_HV2CA 36 -1
AVNHLPRELIFQVWRR VPX_SIVS4 36 -1
AVNHLPRELIFQVWRR Q88145 36 -1
AVNHLPRELIFQVWQR VPX_HV2KR 36 -1
AVNHLPRELIFQVWRR O90319 36 -1
AVNHLPRELIFQVWQR VPX_HV2SB 36 -1
AVNHLPRELIFQVWQR P89156 36 -1
AVNHLPRELIFQVWQR Q76623 36 -1
AVNHLPRELIFQVWQR VPX_HV2RO 36 -1
AVNHLPRELIFQVWRR Q89827 36 -1
ARRHFPEVMLAQVSQY O90275 39 -1
AVNHLPRELIFQVWQR VPX_HV2D2 35 -1
AVNHLPRELIFQVWQR Q76636 35 -1
AVNHLPRELIFQVWRR Q88137 36 -1
AVNHLPRELIFQVWRR VPX_SIVSP 36 -1
AVNHLPRELIFQVWRR Q88125 36 -1
AVNHLPRELIFQVWRR Q88131 36 -1
ARKHFPLIILNAVSEY VPR_SIVGB 35 -1
HIVVPRVPX3 Length of motif = 17 Motif number = 3
VPR/VPX motif III - 3
PCODE ST INT
IIRILQQLLFIHFRIGC O42071 60 14
IIRILQQLLFIHFRIGC VPR_HV1BR 60 14
IIRILQQLLFIHFRIGC Q79252 60 14
IIRILQQLLFIHFRIGC Q79248 60 14
IIRILQQLLFIHFRIGC Q79245 60 14
IIRILQQLLFIHFRIGC Q79238 60 14
IIRILQQLLFIHFRIGC O71267 60 14
IIRILQQLLFIHFRIGC O71254 60 14
IIRILQQLLFIHFRIGC O73196 60 14
IIRILQQLLFIHFRIGC Q71999 60 14
IIRILQQLLFIHFRIGC Q79241 60 14
IIRILQQLLFIHFRIGC Q79243 60 14
IIRILQQLLFIHFRIGC Q79275 60 14
IIRILQQLLFIHFRIGC O71258 60 14
IIRILQQLLFIHFRIGC O91890 60 14
IIRILQQLLFIHFRIGC O36203 60 14
IIRILQQLLFIHFRIGC Q74775 60 14
IIRILQQLLFIHFRIGC Q74785 60 14
IIRILQQLLFIHFRIGC Q79251 60 14
IIRILQQLLFIHFRIGC Q74786 60 14
IIRILQQLLFIHFRIGC O36217 60 14
IIRILQQLLFIHFRIGC Q79234 60 14
IIRILQQLLFIHFRIGC Q79279 60 14
IIRILQQLLFIHFRIGC Q79672 60 14
IIRILQQLLFIHFRIGC O40218 60 14
IIRILQQLLFIHFRIGC VPR_HV1JR 60 14
IIRILQQLLFIHFRIGC Q89636 60 14
IIRILQQLLFIHFRIGC Q79788 60 14
IIRILQQLLFIHFRIGC Q72014 60 14
IIRILQQLLFIHFRIGC Q71881 60 14
IIRILQQLLFIHFRIGC O41800 60 14
IIRILQQLLFIHFRIGC Q72981 60 14
IIRILQQLLFIHFRIGC Q72989 60 14
IIRILQQLLFIHFRIGC VPR_HV1Y2 60 14
IIRILQQLLFIHFRIGC Q79264 60 14
IIRILQQLLFIHFRIGC Q71931 60 14
IIRILQQLLFIHFRIGC Q71925 60 14
IIRILQQLLFIHFRIGC Q71911 60 14
IIRILQQLLFIHFRIGC Q71904 60 14
IIRILQQLLFIHFRIGC Q71897 60 14
IIRILQQLLFIHFRIGC O42045 60 14
IIRILQQLLFIHFRIGC O36216 60 14
IIRILQQLLFIHFRIGC O36210 60 14
IIRILQQLLFIHFRIGC Q79235 60 14
IIRILQQLLFIHFRIGC Q79271 60 14
IIRILQQLLFIHFRIGC Q79242 60 14
IIRILQQLLFIHFRIGC O41768 60 14
IIRILQQLLFIHFRIGC P87921 60 14
IIRILQQLLFIHFRIGC Q75757 60 14
IIRILQQLLFIHFRIGC Q79257 60 14
IIRILQQLLFIHFRIGC Q79793 60 14
IIRILQQLLFIHFRIGC VPR_HV1N5 60 14
IIRILQQLLFIHFRIGC O71972 60 14
IIRILQQLLFIHFRIGC O42084 60 14
IIRILQQLLFIHFRIGC VPR_HV1RH 60 14
IIRILQQLLFIHFRIGC O70893 60 14
IIRILQQLLFIHFRIGC Q79269 60 14
IIRILQQLLFIHFRIGC VPR_HV1A2 60 14
IIRILQQLLFIHFRIGC O71967 60 14
IIRILQQLLFIHFRIGC O90092 60 14
IIRILQQLLFIHFRIGC O90100 60 14
LIRILQQLLFIHFRIGC Q79260 60 14
IIRTLQQLLFIHFRIGC Q79281 60 14
IIRILQQLLFIHFRIGC Q79276 60 14
IIRILQQLLFIHFRIGC Q79239 60 14
IIRILQQLLFIHFRIGC VPR_HV1EL 60 14
IIRILQQLLFTHFRIGC O36202 60 14
IIRILQQLLFTHFRIGC O36205 60 14
IIRILQQLLFTHFRIGC O36206 60 14
IIRILQQLLFIHFRIGC Q79273 60 14
IIRTLQQLLFIHFRIGC O36213 60 14
IIRILQQLLFIHFRIGC O89942 60 14
LIRILQQLLFIHFRIGC Q71918 60 14
IIRILQQLLFTHFRIGC O36215 60 14
IIRTLQQLLFIHFRIGC Q79237 60 14
IIRILQQLLFIHFRIGC Q72492 60 14
IIRILQQLLFIHFRIGC Q79270 60 14
IIRTLQQLLFIHFRIGC O70676 60 14
IIRILQQLLFIHFRIGC Q79280 60 14
IIRILQQLLFVHFRIGC P88158 60 14
LIRILQQLLFIHFRIGC VPR_HV1Z2 60 14
IIRILQQLLFIHFRIGC O71263 60 14
LIRILQQLLFIHFRIGC Q79253 60 14
IIRILQQLLFIHFRIGC O42058 60 14
IIRILQQLLFVHFRIGC Q74455 60 14
IIRILQQLLFVHFRIGC O72610 60 14
IIRSLQQLLFIHFRIGC VPR_HV1MA 60 14
LIRTLQQLLFIHFRIGC Q79244 60 14
IIRILQQLLFIHFRIGC O70888 60 14
IIRLLQQLLFIHFRIGC O90075 60 14
IIRILQQLLFIHFRIGC Q79246 60 14
IIRMLQQLLFIHFRIGC Q79266 60 14
LIRILQQLLFIHFRIGC Q79278 60 14
IIRILQQLLLIHFRIGC O90160 60 14
IIRILQQLLFIHFRIGR Q89838 60 14
LIRMLQQLLFIHFRIGC Q74809 60 14
IIRILQQLLFIHYRIGC O91082 60 14
IVRILQQLLFIHFRIGC Q79277 60 14
MIRTLQQLLFIHFRIGC O71273 60 14
IIRILQQLLFIHFRIGC VPR_HV1OY 60 14
IIRILQRLLFVHFRIGC O12160 60 14
LIRTLQQLLFIHFRIGC Q71815 60 14
IIRTLQQLLFIHFRIGC O71277 60 14
LIRILQQLLFIHFRIGC Q89677 60 14
LIRILQQLLFIHFRIGC Q89494 60 14
IIRILQQLLFIHFRIGC Q74837 60 14
IIRILQQLLFIHFRIGC O41785 60 14
IIRSLQQLLFIHFRIGC Q79233 60 14
IIRILQQLLFIHFRIGC Q79263 60 14
LIRILQQLLFIHFRIGC Q73369 60 14
IIRILQQLLFIHFRIGC Q74784 60 14
IIRILQQLLFIHFRIGC Q79249 60 14
IIRTLQQLLFIHFRIGC Q79247 60 14
IIRILQQLLFIHFRIGC VPR_HV1MN 60 14
IIRILQQLLFIHFRIGC Q79256 60 14
IIRILQQLLFIHFRIGC O36218 60 14
ITRILQQLLFIHFRIGC Q71944 60 14
IIRIPQQLLFTHFRIGC O42054 60 14
IIRILQQMLFIHFRIGC Q79262 56 14
ITRTLQQLLFIHFRIGC Q73332 60 14
IIRILQQLLFIHFRIGC Q79267 60 14
IIRILQQLLFIHFRIGC O92296 60 14
IIRMLQQLLFIHFRIGC Q79236 60 14
IIRILQQLLFIHFRIGC O89928 60 14
LIRTLQQLLFIHFRIGC Q79259 60 14
IIRTLQQLLFIHFRIGC O36212 60 14
IIRTLQQLLFIHFRIGC O42035 60 14
IIRTLQQLLFIHFRIGC O42036 60 14
IIRTLQQLLFIHFRIGC O42077 60 14
IIRILQQLLFTHFRIGC O36208 60 14
MIRMLQQLLFIHFRIGC O90084 60 14
IIRILQQLLFVHFRIGC O72615 60 14
IIRVLQQLLFIHFRIGC P88436 60 14
LIRILQQLLFIHFRIGC Q79265 60 14
IIRILQQLLFIHFRIGC Q89588 60 14
IIRILQQLLFVHFRIGC P88152 60 14
LIRMLQQLLFIHFRIGC Q79255 60 14
IIRILQQLLFIHFRIGC Q71938 60 14
IIRTLQQLLFIHFRIGC Q74772 60 14
IIRTLQQLLFIHFRIGC Q74773 60 14
IIRMLQQLLFTHFRIGC Q79284 60 14
LLRSLQQLLFIHFRIGC O36207 60 14
LIRSLQQLLFIHFRVGC Q79268 60 14
IIRILQQLLFIHFRIGC Q79274 60 14
IIRILQQLLFIHFRIGC O41776 60 14
LIRILQQLLFIHFRIGC O89935 60 14
IIRILQQPLFIHFRIGC O36209 60 14
LIRMLQQLLFTHFRIGC Q79282 60 14
IIRILQQLLFIHFRIGC Q74781 60 14
IIRILQQLLFIHFRIGC Q74776 60 14
LIRTLQQLLFIHFRIGC O70898 60 14
IIRMLQQLLFVHFRIGC Q97061 59 14
IIRILQQLLFIHFRIGC Q79254 60 14
IIRILQQLLFIHYRIGC O91897 60 14
IIRILQQLPFIHFRIGC Q72500 60 14
LIRSLQQLLFIHFRIGC Q77693 60 14
IIRILQQLLFIHFRIGC VPR_HV1SC 60 14
IIRILQQLLFIHFRIGC Q74780 60 14
IIRILQQLLFIHFRMGC Q79258 60 14
LLRNLQQLLFTHFRIGC O36204 60 14
IIRILQQLLFIHFRIRC Q74777 60 14
IIRILQQLLFIHFRIGC Q74779 60 14
IIRILQQLLFTHYRIGC Q77375 60 14
LIRMLQQLLFIHFRIGC Q89467 60 14
IIRILQLLLFAHFRIGC O91140 60 14
IIRVLQQLLFIHFRIGC P88434 60 14
IIRILQQLLFIHFRIGC Q89493 60 14
IIRILQQLLFIHFRIGC O90066 60 14
IIRILLLLLFIHFRIGC Q76577 60 14
IIRILQQLLFIHYRIGC O91148 60 14
LIRMLQQLLFTHFRIGC O90059 60 14
LIRTLQQLMFIHFRIGC Q75004 60 14
IIRILQHLLFIHFRLGC VPR_SIVCZ 60 14
IIRILQQLLFIHFQNWV VPR_HV1B1 60 14
IIRILQQLLFIHFQNWV VPR_HV1B5 60 14
IIRILQQLLFVHFRIGC P89694 60 14
IIRILQQLLFAHFRIGC O91136 60 14
IIRILQQLLFAHFRIGC O91152 60 14
IIRILQQLLFTHYRIGC Q79668 60 14
IIRTLQQLLSIHFRIGC O36211 60 14
FIRTLQQLLFVHFRIGC P89843 60 14
IIRILQQLQLIHFRIGC Q74778 60 14
IIRILQQILFTHYRIGC O91132 60 14
IIRILQQLMFIHYRIGC O91162 60 14
IIRILQQLIFAHFRIGC O91166 60 14
IIRILQLILFAHFRIGC O91144 60 14
IIRLLQLMIFAHFRIGC O91170 60 14
IIRILQQLLFTHFRIGC O91180 60 14
LIRILQRALFIHFRSGC VPR_SIVS4 61 14
LIRILQRALFMHFRGGC O11785 61 14
LIRILQRALFMHFRGGC Q07392 61 14
LIRILQRALFMHFRGGC Q88017 61 14
LIRILQRALFMHFRGGC VPR_SIVMK 61 14
LIRILQRALFMHFRGGC VPR_SIVML 61 14
LIRILQRALFMHFRGGC Q85605 61 14
LIRILQRALFIHFRGGC VPR_SIVSP 61 14
LIRILQRALFIHFRGGC Q89638 61 14
LIRILQRALFIHFRSGC P89157 61 14
LIRILQRALFIHFRSGC VPR_SIVM1 61 14
LIKILQRALFMHFRGGC Q04270 61 14
LIKILQRALFMHFRGGC O57061 61 14
LIKILQRALFMHFRGGC Q88146 61 14
LIRILQRALFIHFRGGC O90320 61 14
LIRILQRALFTHFRAGC O12332 65 14
LIRILQRALFIHFRGGC Q87957 61 14
LIRILQGALFIHFRGGC Q87966 61 14
LIRILQRALFTHFRAGC Q76624 65 14
LIKILQRALFLHFRAGC VPR_HV2D2 65 14
LIRVLQRALFTHFRAGC VPR_HV2SB 65 14
LIKILQRALFLHFRAGC Q76637 65 14
LIRILQRALFAHFRAGC VPR_HV2NZ 65 14
LIRVLQRALFTHFRAGC VPR_HV2CA 65 14
LIKTLQRALFVHFRAGC VPR_HV2BE 65 14
LIKVLQRALFTHFRAGC VPR_HV2RO 65 14
LIKLLQRALFLHFRGGC Q74231 90 14
LIRVLQRALFVHIRAGC VPR_HV2D1 65 14
LIRILQRALFVHLRAGC VPR_HV2G1 65 14
LINVLQRALFVHFRAGC VPR_HV2KR 65 14
LIRILQRALLLHFRAGC VPR_HV2ST 64 14
YYRLVQKALFVHFRCGC Q88101 74 18
YYRLVQKALFVHIRCGC O12384 74 18
YYKLVQRALFVHFRCGC O12383 74 18
YYRLVQKALFVHFRCGC VPX_SIVA1 74 18
YCRILQKALFVHMKGRC Q87110 90 19
YLCLIQKALFMHCKKGC VPX_SIVM1 71 19
YLCLIQKALFMHCKKGC Q89552 71 19
YLCLIQKALFMHCKKGC Q88064 71 19
YLCLIQKALFMHCKKGC Q88050 71 19
YLCLIQKALFMHCKKGC Q88020 71 19
YLCLIQKALFMHCKKGC Q07393 71 19
YLCLIQKALFMHCKKGC Q04273 71 19
YLCLMQKALFMHCKKGC Q85604 71 19
YLCLMQKALFMHCKKGC VPX_SIVML 71 19
YLCLMQKALFMHCKKGC VPX_SIVMK 71 19
YLCLIQKALFTHCKKGC Q88057 71 19
YLCLMQKAVFIHFKRGC VPX_HV2G1 71 19
YLCLIQKALFVHCKEGC Q88068 71 19
YYKLVQKALFVHFRCGC VPX_SIVAG 74 18
YLCIMQKAVYIHFKKGC VPX_HV2D1 71 19
YLCLMQKAMFIHFAKGC Q89721 70 19
YYRVLQKALFVHMKGRC Q87481 90 19
YLCLMQKAIFTHFKRGC VPX_HV2BE 71 19
YLCLMQKAMFIHLKKGC P88144 71 19
YYRLVQKALFVHFRCGC VPX_SIVAT 74 18
YLCLIQKASFMHCKKGC Q88058 71 19
YYRILQKALYVHMKGRC Q87483 90 19
YYRIVQKSMFVHFRCGC VPX_SIVAI 74 18
YLCLMQKAMFIHSKRGC VPX_HV2ST 71 19
YLCLMQKAVFIHFKRGC VPX_HV2CA 71 19
YLCLIQKALFVHCKKGC VPX_SIVS4 71 19
YLCLIQKALFMHSKRGC Q88145 71 19
YLRLMQYAMFIHVKKGC VPX_HV2KR 71 19
YLCLIQKALFVHCKRGC O90319 71 19
YLCLMQKAVFMHFKKGC VPX_HV2SB 71 19
YLILIQKALFMHCKKGC P89156 71 19
YLCLMQKAMYIHGRKGC Q76623 71 19
YLCIIQKAVYMHVRKGC VPX_HV2RO 71 19
YLCLIQKALFMHCKKGC Q89827 71 19
FITLVNRALFLHLPTCP O90275 69 14
YLLLMQKAMFVHYTKGC VPX_HV2D2 70 19
YLLLMQKAMFVHYTKGC Q76636 70 19
YLCLIQKAMFMHCKKGC Q88137 71 19
YLCLIQKAMFMHCKKGC VPX_SIVSP 71 19
YLCLIQKAMFMHCKKGC Q88125 71 19
YLCSIQKAMFMHCKKGC Q88131 71 19
FITLMNRAIWVHLAQGC VPR_SIVGB 65 14
User query: Display/Full Code "HIVVPRVPX"